Reformat whole codebase with astyle.options (#128)
[openjpeg.git] / src / bin / jp3d / opj_jp3d_compress.c
old mode 100755 (executable)
new mode 100644 (file)
index b774e14..2b40da3
-/*\r
- * Copyright (c) 2001-2003, David Janssens\r
- * Copyright (c) 2002-2003, Yannick Verschueren\r
- * Copyright (c) 2003-2005, Francois Devaux and Antonin Descampe\r
- * Copyright (c) 2005, Herve Drolon, FreeImage Team\r
- * Copyright (c) 2002-2005, Communications and remote sensing Laboratory, Universite catholique de Louvain, Belgium\r
- * Copyright (c) 2006, M�nica D�ez Garc�a, Image Processing Laboratory, University of Valladolid, Spain\r
- * All rights reserved.\r
- *\r
- * Redistribution and use in source and binary forms, with or without\r
- * modification, are permitted provided that the following conditions\r
- * are met:\r
- * 1. Redistributions of source code must retain the above copyright\r
- *    notice, this list of conditions and the following disclaimer.\r
- * 2. Redistributions in binary form must reproduce the above copyright\r
- *    notice, this list of conditions and the following disclaimer in the\r
- *    documentation and/or other materials provided with the distribution.\r
- *\r
- * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS `AS IS'\r
- * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE\r
- * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE\r
- * ARE DISCLAIMED.  IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE\r
- * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR\r
- * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF\r
- * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS\r
- * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN\r
- * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)\r
- * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE\r
- * POSSIBILITY OF SUCH DAMAGE.\r
- */\r
-#include <stdio.h>\r
-#include <string.h>\r
-#include <stdlib.h>\r
-\r
-#include "opj_config.h"\r
-#include "openjp3d.h"\r
-#include "opj_getopt.h"\r
-#include "convert.h"\r
-\r
-#ifdef _WIN32\r
-#include <windows.h>\r
-#else\r
-#define stricmp strcasecmp\r
-#define strnicmp strncasecmp\r
-#endif /* _WIN32 */\r
-\r
-/* ----------------------------------------------------------------------- */\r
-\r
-void encode_help_display() {\r
-       fprintf(stdout,"List of parameters for the JPEG2000 Part 10 encoder:\n");\r
-       fprintf(stdout,"------------\n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"Required Parameters (except with -h):\n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-i           : source file  (-i source.bin or source*.pgx) \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-m           : source characteristics file (-m imgfile.img) \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-o           : destination file (-o dest.jp3d) \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"Optional Parameters:\n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-h           : display the help information \n ");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-n           : number of resolutions (-n 3,3,3) \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-I           : use the irreversible transforms: ICT + DWT 9-7 (-I) \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-C           : coding algorithm (-C 2EB) [2EB, 3EB] \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-r           : different compression ratios for successive layers (-r 20,10,5)\n ");\r
-       fprintf(stdout,"                 - The rate specified for each quality level is the desired compression factor.\n");\r
-       fprintf(stdout,"                 - Rate 1 means lossless compression\n");\r
-       fprintf(stdout,"               (options -r and -q cannot be used together)\n ");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-q           : different psnr for successive layers (-q 30,40,50) \n ");\r
-       fprintf(stdout,"               (options -r and -q cannot be used together)\n ");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-b           : size of code block (-b 32,32,32) \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-c           : size of precinct (-c 128,128,128) \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-t           : size of tile (-t 512,512,512) \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-p           : progression order (-p LRCP) [LRCP, RLCP, RPCL, PCRL, CPRL] \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-s           : subsampling factor (-s 2,2,2) [-s X,Y,Z] \n");\r
-       fprintf(stdout,"                          - Remark: subsampling bigger than 2 can produce error\n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-SOP         : write SOP marker before each packet \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-EPH         : write EPH marker after each header packet \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-M           : code-block style (-M 0) [1=BYPASS(LAZY) 2=RESET 4=RESTART(TERMALL)\n");\r
-       fprintf(stdout,"                 8=VSC 16=PTERM 32=SEGSYM 64=3DCTXT] \n");\r
-       fprintf(stdout,"                 Indicate multiple modes by adding their values. \n");\r
-       fprintf(stdout,"                 ex: RESTART(4) + RESET(2) + SEGMARK(32) = -M 38\n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-D           : define DC offset (-D 12) \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-x           : create an index file *.Idx (-x index_name.Idx) \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-ROI         : c=%%d,U=%%d : quantization indices upshifted \n");\r
-       fprintf(stdout,"               for component c=%%d [%%d = 0,1,2]\n");\r
-       fprintf(stdout,"               with a value of U=%%d [0 <= %%d <= 37] (i.e. -ROI:c=0,U=25) \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-d           : offset of the origin of the volume (-d 150,300,100) \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"-l           : offset of the origin of the tiles (-l 100,75,25) \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"DEFAULT CODING:\n");\r
-       fprintf(stdout,"------------\n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout," * Lossless\n");\r
-       fprintf(stdout," * 1 tile\n");\r
-       fprintf(stdout," * Size of precinct : 2^15 x 2^15 x 2^15 (means 1 precinct)\n");\r
-       fprintf(stdout," * Size of code-block : 64 x 64 x 64\n");\r
-       fprintf(stdout," * Number of resolutions in x, y and z axis: 3\n");\r
-       fprintf(stdout," * No SOP marker in the codestream\n");\r
-       fprintf(stdout," * No EPH marker in the codestream\n");\r
-       fprintf(stdout," * No sub-sampling in x, y or z direction\n");\r
-       fprintf(stdout," * No mode switch activated\n");\r
-       fprintf(stdout," * Progression order: LRCP\n");\r
-       fprintf(stdout," * No index file\n");\r
-       fprintf(stdout," * No ROI upshifted\n");\r
-       fprintf(stdout," * No offset of the origin of the volume\n");\r
-       fprintf(stdout," * No offset of the origin of the tiles\n");\r
-       fprintf(stdout," * Reversible DWT 5-3 on each 2D slice\n");\r
-       fprintf(stdout," * Coding algorithm: 2D-EBCOT \n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"REMARKS:\n");\r
-       fprintf(stdout,"---------\n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"- The markers written to the main_header are : SOC SIZ COD QCD COM.\n");\r
-       fprintf(stdout,"- COD and QCD markers will never appear in the tile_header.\n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"- You need enough disk space memory (twice the original) to encode \n");\r
-       fprintf(stdout,"the volume,i.e. for a 1.5 GB volume you need a minimum of 3GB of disk memory)\n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"- When loading *.pgx files, a relative path to directory is needed for input argument \n");\r
-       fprintf(stdout," followed by the common prefix of the slices and a '*' character representing sequential numeration.\n");\r
-       fprintf(stdout,"( -i relativepath/slices*.pgx )\n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout," - The index file has the structure below:\n");\r
-       fprintf(stdout,"\n");\r
-       fprintf(stdout,"\t      Image_height Image_width Image_depth\n");\r
-       fprintf(stdout,"\t      Progression order: 0 (LRCP)\n");\r
-       fprintf(stdout,"\t      Tiles_size_X Tiles_size_Y Tiles_size_Z\n");\r
-       fprintf(stdout,"\t      Components_nb\n");\r
-       fprintf(stdout,"\t      Layers_nb\n");\r
-       fprintf(stdout,"\t      Decomposition_levels\n");\r
-       fprintf(stdout,"\t      [Precincts_size_X_res_Nr Precincts_size_Y_res_Nr Precincts_size_Z_res_Nr]\n\t  ...\n");\r
-       fprintf(stdout,"\t      [Precincts_size_X_res_0 Precincts_size_Y_res_0 Precincts_size_Z_res_0]\n");\r
-       fprintf(stdout,"\t      Main_header_end_position\n");\r
-       fprintf(stdout,"\t      Codestream_size\n");\r
-       fprintf(stdout,"\t      Tile_0 [start_pos end_header end_pos TotalDisto NumPix MaxMSE]\n");\r
-       fprintf(stdout,"\t      ...\n");\r
-       fprintf(stdout,"\t      Tile_Nt [  ''         ''        ''        ''       ''    ''  ]\n");\r
-       fprintf(stdout,"\t  Tpacket_0 [Tile layer res. comp. prec. start_pos end_pos disto]\n");\r
-       fprintf(stdout,"\t  ...\n");\r
-       fprintf(stdout,"\t  Tpacket_Np [''   ''    ''   ''    ''       ''       ''     '' ]\n");\r
-       fprintf(stdout,"\t  MaxDisto\n");\r
-       fprintf(stdout,"\t  TotalDisto\n\n");\r
-       fprintf(stdout,"\n");\r
-\r
-}\r
-\r
-OPJ_PROG_ORDER give_progression(char progression[4]) {\r
-       if(strncmp(progression, "LRCP", 4) == 0) {\r
-               return LRCP;\r
-       }\r
-       if(strncmp(progression, "RLCP", 4) == 0) {\r
-               return RLCP;\r
-       }\r
-       if(strncmp(progression, "RPCL", 4) == 0) {\r
-               return RPCL;\r
-       }\r
-       if(strncmp(progression, "PCRL", 4) == 0) {\r
-               return PCRL;\r
-       }\r
-       if(strncmp(progression, "CPRL", 4) == 0) {\r
-               return CPRL;\r
-       }\r
-\r
-       return PROG_UNKNOWN;\r
-}\r
-\r
-OPJ_TRANSFORM give_transform(char transform[4]) {\r
-       if(strncmp(transform, "2DWT", 4) == 0) {\r
-               return TRF_2D_DWT;\r
-       }\r
-       if(strncmp(transform, "3DWT", 4) == 0) {\r
-               return TRF_3D_DWT;\r
-       }\r
-       return TRF_UNKNOWN;\r
-}\r
-\r
-OPJ_ENTROPY_CODING give_coding(char coding[3]) {\r
-\r
-       if(strncmp(coding, "2EB", 3) == 0) {\r
-               return ENCOD_2EB;\r
-       }\r
-       if(strncmp(coding, "3EB", 3) == 0) {\r
-               return ENCOD_3EB;\r
-       }\r
-       /*if(strncmp(coding, "2GR", 3) == 0) {\r
-               return ENCOD_2GR;\r
-       }\r
-       if(strncmp(coding, "3GR", 3) == 0) {\r
-               return ENCOD_3GR;\r
-       }*/\r
-\r
-       return ENCOD_UNKNOWN;\r
-}\r
-\r
-int get_file_format(char *filename) {\r
-       int i;\r
-       static const char *extension[] = {"pgx", "bin", "img", "j3d", "jp3d", "j2k"};\r
-       static const int format[] = { PGX_DFMT, BIN_DFMT, IMG_DFMT, J3D_CFMT, J3D_CFMT, J2K_CFMT};\r
-       char * ext = strrchr(filename, '.');\r
-       if (ext) {\r
-               ext++;\r
-        for(i = 0; i < sizeof(format)/sizeof(*format); i++) {\r
-                       if(strnicmp(ext, extension[i], 3) == 0) {\r
-                return format[i];\r
-                       }\r
-               }\r
-       }\r
-\r
-       return -1;\r
-}\r
-\r
-/* ------------------------------------------------------------------------------------ */\r
-\r
-int parse_cmdline_encoder(int argc, char **argv, opj_cparameters_t *parameters) {\r
-       int i, value;\r
-\r
-       /* parse the command line */\r
-\r
-       while (1) {\r
-               int c = opj_getopt(argc, argv, "i:m:o:r:q:f:t:n:c:b:x:p:s:d:hP:S:E:M:D:R:l:T:C:A:I");\r
-               if (c == -1)\r
-                       break;\r
-               switch (c) {\r
-                       case 'i':                       /* input file */\r
-                       {\r
-                               char *infile = opj_optarg;\r
-                               parameters->decod_format = get_file_format(infile);\r
-                               switch(parameters->decod_format) {\r
-                                       case PGX_DFMT:\r
-                                       case BIN_DFMT:\r
-                                       case IMG_DFMT:\r
-                                               break;\r
-                                       default:\r
-                                               fprintf(stdout, "[ERROR] Unrecognized format for infile : %s [accept only *.pgx or *.bin] !!\n\n", infile);\r
-                                               return 1;\r
-                                               break;\r
-                               }\r
-                               strncpy(parameters->infile, infile, MAX_PATH);\r
-                               fprintf(stdout, "[INFO] Infile: %s \n", parameters->infile);\r
-\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ----------------------------------------------------- */\r
-                       case 'm':                       /* input IMG file */\r
-                       {\r
-                               char *imgfile = opj_optarg;\r
-                               int imgformat = get_file_format(imgfile);\r
-                               switch(imgformat) {\r
-                                       case IMG_DFMT:\r
-                                               break;\r
-                                       default:\r
-                                               fprintf(stdout, "[ERROR] Unrecognized format for imgfile : %s [accept only *.img] !!\n\n", imgfile);\r
-                                               return 1;\r
-                                               break;\r
-                               }\r
-                               strncpy(parameters->imgfile, imgfile, MAX_PATH);\r
-                               fprintf(stdout, "[INFO] Imgfile: %s Format: %d\n", parameters->imgfile, imgformat);\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ----------------------------------------------------- */\r
-                       case 'o':                       /* output file */\r
-                       {\r
-                               char *outfile = opj_optarg;\r
-                               parameters->cod_format = get_file_format(outfile);\r
-                               switch(parameters->cod_format) {\r
-                                       case J3D_CFMT:\r
-                                       case J2K_CFMT:\r
-                                       case LSE_CFMT:\r
-                                               break;\r
-                                       default:\r
-                                               fprintf(stdout, "[ERROR] Unknown output format volume %s [only *.j2k, *.lse3d or *.jp3d]!! \n", outfile);\r
-                                               return 1;\r
-                                               break;\r
-                               }\r
-                               strncpy(parameters->outfile, outfile, MAX_PATH);\r
-                               fprintf(stdout, "[INFO] Outfile: %s \n", parameters->outfile);\r
-                       }\r
-                       break;\r
-\r
-                               /* ----------------------------------------------------- */\r
-                       \r
-                       case 'r':                       /* define compression rates for each layer */\r
-                       {\r
-                               char *s = opj_optarg;\r
-                               while (sscanf(s, "%f", &parameters->tcp_rates[parameters->tcp_numlayers]) == 1) {\r
-                                       parameters->tcp_numlayers++;\r
-                                       while (*s && *s != ',') {\r
-                                               s++;\r
-                                       }\r
-                                       if (!*s)\r
-                                               break;\r
-                                       s++;\r
-                               }\r
-                               parameters->cp_disto_alloc = 1;\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ----------------------------------------------------- */\r
-                       \r
-                       case 'q':                       /* define distorsion (PSNR) for each layer */\r
-                       {\r
-                               char *s = opj_optarg;\r
-                               while (sscanf(s, "%f", &parameters->tcp_distoratio[parameters->tcp_numlayers]) == 1) {\r
-                                       parameters->tcp_numlayers++;\r
-                                       while (*s && *s != ',') {\r
-                                               s++;\r
-                                       }\r
-                                       if (!*s)\r
-                                               break;\r
-                                       s++;\r
-                               }\r
-                               parameters->cp_fixed_quality = 1;\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ----------------------------------------------------- */\r
-\r
-                       case 'f':       \r
-                       {\r
-                               fprintf(stdout, "/---------------------------------------------------\\\n");\r
-                               fprintf(stdout, "|  Fixed layer allocation option not implemented !!  |\n");\r
-                               fprintf(stdout, "\\---------------------------------------------------/\n");\r
-                               /*int *row = NULL, *col = NULL;\r
-                               int numlayers = 0, matrix_width = 0;\r
-\r
-                               char *s = opj_optarg;\r
-                               sscanf(s, "%d", &numlayers);\r
-                               s++;\r
-                               if (numlayers > 9)\r
-                                       s++;\r
-\r
-                               parameters->tcp_numlayers = numlayers;\r
-                               matrix_width = parameters->numresolution[0] + parameters->numresolution[1] + parameters->numresolution[2];\r
-                               parameters->cp_matrice = (int *) malloc(numlayers * matrix_width * sizeof(int));\r
-                               s = s + 2;\r
-\r
-                               for (i = 0; i < numlayers; i++) {\r
-                                       row = &parameters->cp_matrice[i * matrix_width];\r
-                                       col = row;\r
-                                       parameters->tcp_rates[i] = 1;\r
-                                       sscanf(s, "%d,", &col[0]);\r
-                                       s += 2;\r
-                                       if (col[0] > 9)\r
-                                               s++;\r
-                                       col[1] = 0;\r
-                                       col[2] = 0;\r
-                                       for (j = 1; j < matrix_width; j++) {\r
-                                               col += 3; j+=2;\r
-                                               sscanf(s, "%d,%d,%d", &col[0], &col[1], &col[2]);\r
-                                               s += 6;\r
-                                               if (col[0] > 9)\r
-                                                       s++;\r
-                                               if (col[1] > 9)\r
-                                                       s++;\r
-                                               if (col[2] > 9)\r
-                                                       s++;\r
-                                       }\r
-                                       if (i < numlayers - 1)\r
-                                               s++;\r
-                               }\r
-                               parameters->cp_fixed_alloc = 1; */\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ----------------------------------------------------- */\r
-\r
-                       case 't':                       /* tiles */\r
-                       {\r
-                               if (sscanf(opj_optarg, "%d,%d,%d", &parameters->cp_tdx, &parameters->cp_tdy, &parameters->cp_tdz) !=3) {\r
-                                       fprintf(stdout, "[ERROR] '-t' 'dimensions of tiles' argument error !  [-t tdx,tdy,tdz]\n");\r
-                                       return 1;\r
-                               }\r
-                               parameters->tile_size_on = true;\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ----------------------------------------------------- */\r
-                       \r
-                       case 'n':                       /* resolution */\r
-                       {\r
-                               int aux;\r
-                               aux = sscanf(opj_optarg, "%d,%d,%d", &parameters->numresolution[0], &parameters->numresolution[1], &parameters->numresolution[2]);\r
-                               if (aux == 2) \r
-                                       parameters->numresolution[2] = 1;\r
-                               else if (aux == 1) {\r
-                                       parameters->numresolution[1] = parameters->numresolution[0];\r
-                                       parameters->numresolution[2] = 1;\r
-                               }else if (aux == 0){\r
-                                       parameters->numresolution[0] = 1;\r
-                                       parameters->numresolution[1] = 1;\r
-                                       parameters->numresolution[2] = 1;\r
-                               }\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ----------------------------------------------------- */\r
-                       case 'c':                       /* precinct dimension */\r
-                       {\r
-                               char sep;\r
-                               int res_spec = 0;\r
-                               int aux;\r
-                               char *s = opj_optarg;\r
-                               do {\r
-                                       sep = 0;\r
-                                       aux = sscanf(s, "[%d,%d,%d]%c", &parameters->prct_init[0][res_spec], &parameters->prct_init[1][res_spec], &parameters->prct_init[2][res_spec], &sep);\r
-                                       if (sep == ',' && aux != 4) {\r
-                                               fprintf(stdout, "[ERROR] '-c' 'dimensions of precincts' argument error !  [-c [prcx_res0,prcy_res0,prcz_res0],...,[prcx_resN,prcy_resN,prcz_resN]]\n");\r
-                                               return 1;\r
-                                       }\r
-                                       parameters->csty |= 0x01;\r
-                                       res_spec++;\r
-                                       s = strpbrk(s, "]") + 2;\r
-                               }\r
-                               while (sep == ',');\r
-                               parameters->res_spec = res_spec; /* number of precinct size specifications */\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ----------------------------------------------------- */\r
-                       \r
-                       case 'b':                       /* code-block dimension */\r
-                       {\r
-                               int cblockw_init = 0, cblockh_init = 0, cblockl_init = 0;\r
-                               if (sscanf(opj_optarg, "%d,%d,%d", &cblockw_init, &cblockh_init, &cblockl_init) != 3) {\r
-                                       fprintf(stdout, "[ERROR] '-b' 'dimensions of codeblocks' argument error !  [-b cblkx,cblky,cblkz]\n");\r
-                                       return 1;\r
-                               }\r
-                               if (cblockw_init * cblockh_init * cblockl_init > (1<<18) || cblockw_init > 1024 || cblockw_init < 4 || cblockh_init > 1024 || cblockh_init < 4 || cblockl_init > 1024 || cblockl_init < 4) {\r
-                                       fprintf(stdout,"[ERROR] Size of code_block error (option -b) !!\n\nRestriction :\n * width*height*length<=4096\n * 4<=width,height,length<= 1024\n\n");\r
-                                       return 1;\r
-                               }\r
-                               parameters->cblock_init[0] = cblockw_init;\r
-                               parameters->cblock_init[1] = cblockh_init;\r
-                               parameters->cblock_init[2] = cblockl_init;\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ----------------------------------------------------- */\r
-                       \r
-                       case 'x':                       /* creation of index file */\r
-                       {\r
-                               char *index = opj_optarg;\r
-                               strncpy(parameters->index, index, MAX_PATH);\r
-                               parameters->index_on = 1;\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ----------------------------------------------------- */\r
-                       \r
-                       case 'p':                       /* progression order */\r
-                       {\r
-                               char progression[4];\r
-\r
-                               strncpy(progression, opj_optarg, 4);\r
-                               parameters->prog_order = give_progression(progression);\r
-                               if (parameters->prog_order == -1) {\r
-                                       fprintf(stdout, "[ERROR] Unrecognized progression order [LRCP, RLCP, RPCL, PCRL, CPRL] !!\n");\r
-                                       return 1;\r
-                               }\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ----------------------------------------------------- */\r
-                       \r
-                       case 's':                       /* subsampling factor */\r
-                       {\r
-                               if (sscanf(opj_optarg, "%d,%d,%d", &parameters->subsampling_dx, &parameters->subsampling_dy, &parameters->subsampling_dz) != 3) {\r
-                                       fprintf(stdout, "[ERROR] '-s' sub-sampling argument error !  [-s dx,dy,dz]\n");\r
-                                       return 1;\r
-                               }\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ----------------------------------------------------- */\r
-                       \r
-                       case 'd':                       /* coordonnate of the reference grid */\r
-                       {\r
-                               if (sscanf(opj_optarg, "%d,%d,%d", &parameters->volume_offset_x0, &parameters->volume_offset_y0, &parameters->volume_offset_z0) != 3) {\r
-                                       fprintf(stdout, "[ERROR] -d 'coordonnate of the reference grid' argument error !! [-d x0,y0,z0]\n");\r
-                                       return 1;\r
-                               }\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ----------------------------------------------------- */\r
-                       \r
-                       case 'h':                       /* display an help description */\r
-                       {\r
-                               encode_help_display();\r
-                               return 1;\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ----------------------------------------------------- */\r
-\r
-                       case 'P':                       /* POC */\r
-                       {\r
-                               int numpocs = 0;                /* number of progression order change (POC) default 0 */\r
-                               opj_poc_t *POC = NULL;  /* POC : used in case of Progression order change */\r
-\r
-                               char *s = opj_optarg;\r
-                               POC = parameters->POC;\r
-\r
-                               fprintf(stdout, "/----------------------------------\\\n");\r
-                               fprintf(stdout, "|  POC option not fully tested !!  |\n");\r
-                               fprintf(stdout, "\\----------------------------------/\n");\r
-                               \r
-                               while (sscanf(s, "T%d=%d,%d,%d,%d,%d,%s", &POC[numpocs].tile,\r
-                                                                                                               &POC[numpocs].resno0, &POC[numpocs].compno0,\r
-                                                                                                               &POC[numpocs].layno1, &POC[numpocs].resno1,\r
-                                                                                                               &POC[numpocs].compno1, POC[numpocs].progorder) == 7) {\r
-                                       POC[numpocs].prg = give_progression(POC[numpocs].progorder);\r
-                                       /* POC[numpocs].tile; */\r
-                                       numpocs++;\r
-                                       while (*s && *s != '/') {\r
-                                               s++;\r
-                                       }\r
-                                       if (!*s) {\r
-                                               break;\r
-                                       }\r
-                                       s++;\r
-                               }\r
-                               parameters->numpocs = numpocs;\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ------------------------------------------------------ */\r
-                               \r
-                       case 'S':                       /* SOP marker */\r
-                       {\r
-                               parameters->csty |= 0x02;\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ------------------------------------------------------ */\r
-                       \r
-                       case 'E':                       /* EPH marker */\r
-                       {\r
-                               parameters->csty |= 0x04;\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ------------------------------------------------------ */\r
-                       \r
-                       case 'M':                       /* Codification mode switch */\r
-                       {\r
-                               fprintf(stdout, "[INFO] Mode switch option not fully tested !!\n");\r
-                               value = 0;\r
-                               if (sscanf(opj_optarg, "%d", &value) == 1) {\r
-                                       for (i = 0; i <= 6; i++) {\r
-                                               int cache = value & (1 << i);\r
-                                               if (cache)\r
-                                                       parameters->mode |= (1 << i);\r
-                                       }\r
-                               }\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ------------------------------------------------------ */\r
-                       \r
-                       case 'D':                       /* DCO */\r
-                       {\r
-                               if (sscanf(opj_optarg, "%d", &parameters->dcoffset) != 1) {\r
-                                       fprintf(stdout, "[ERROR] DC offset error !! [-D %d]\n",parameters->dcoffset);\r
-                                       return 1;\r
-                               }\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ------------------------------------------------------ */\r
-                       \r
-                       case 'R':                       /* ROI */\r
-                       {\r
-                               if (sscanf(opj_optarg, "OI:c=%d,U=%d", &parameters->roi_compno, &parameters->roi_shift) != 2) {\r
-                                       fprintf(stdout, "[ERROR] ROI error !! [-ROI:c='compno',U='shift']\n");\r
-                                       return 1;\r
-                               }\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ------------------------------------------------------ */\r
-                       \r
-                       case 'l':                       /* Tile offset */\r
-                       {\r
-                               if (sscanf(opj_optarg, "%d,%d,%d", &parameters->cp_tx0, &parameters->cp_ty0, &parameters->cp_tz0) != 3) {\r
-                                       fprintf(stdout, "[ERROR] -l 'tile offset' argument error !! [-l X0,Y0,Z0]");\r
-                                       return 1;\r
-                               }\r
-                       }\r
-                       break;\r
-                               \r
-                               /* ------------------------------------------------------ \r
-                               \r
-                       case 'T':                       // Tranformation of original data (2D-DWT/3D-DWT/3D-RLS/2D-DWT+1D-RLS) \r
-                       {\r
-                               char transform[4];\r
-\r
-                               strncpy(transform, opj_optarg, 4);\r
-                               parameters->transform_format = give_transform(transform);\r
-                               if (parameters->transform_format == -1) {\r
-                                       fprintf(stdout, "[ERROR] -T 'Transform domain' argument error !! [-T 2DWT, 3DWT, 3RLS or 3LSE only]");\r
-                    return 1;\r
-                               }\r
-                       }\r
-                       break;\r
-                               \r
-                                ------------------------------------------------------ */\r
-                       \r
-                       case 'C':                       /* Coding of transformed data */\r
-                       {\r
-                               char coding[3];\r
-\r
-                               strncpy(coding, opj_optarg, 3);\r
-                               parameters->encoding_format = give_coding(coding);\r
-                               if (parameters->encoding_format == -1) {\r
-                                       fprintf(stdout, "[ERROR] -C 'Coding algorithm' argument error !! [-C 2EB, 3EB, 2GR, 3GR or GRI only]");\r
-                    return 1;\r
-                               }\r
-                       }\r
-                       break;\r
-                       \r
-                       /* ------------------------------------------------------ */\r
-                       \r
-                       case 'I':                       /* reversible or not */\r
-                       {\r
-                               parameters->irreversible = 1;\r
-                       }\r
-                       break;\r
-                               \r
-                       default:\r
-                               fprintf(stdout, "[ERROR] This option is not valid \"-%c %s\"\n", c, opj_optarg);\r
-                               return 1;\r
-               }\r
-       }\r
-\r
-       /* check for possible errors */\r
-\r
-       if((parameters->infile[0] == 0) || (parameters->outfile[0] == 0)) {\r
-               fprintf(stdout, "usage: jp3d_vm_enc -i volume-file -o jp3d-file (+ options)\n");\r
-               return 1;\r
-       }\r
-\r
-       if((parameters->decod_format == BIN_DFMT) && (parameters->imgfile[0] == 0)) {\r
-               fprintf(stdout, "usage: jp3d_vm_enc -i bin-volume-file -m img-file -o jp3d-file (+ options)\n");\r
-               return 1;\r
-       }\r
-\r
-       if((parameters->decod_format != BIN_DFMT) && (parameters->decod_format != PGX_DFMT) && (parameters->decod_format != IMG_DFMT)) {\r
-               fprintf(stdout, "usage: jp3d_vm_enc -i input-volume-file [*.bin,*.pgx,*.img] -o jp3d-file [*.jp3d,*.j2k] (+ options)\n");\r
-               return 1;\r
-       }\r
-       if((parameters->cod_format != J3D_CFMT) && (parameters->cod_format != J2K_CFMT)) {\r
-               fprintf(stdout, "usage: jp3d_vm_enc -i input-volume-file [*.bin,*.pgx,*.img] -o jp3d-file [*.jp3d,*.j2k] (+ options)\n");\r
-               return 1;\r
-       }\r
-\r
-       if((parameters->encoding_format == ENCOD_2GR || parameters->encoding_format == ENCOD_3GR) && parameters->transform_format != TRF_3D_LSE && parameters->transform_format != TRF_3D_RLS) {\r
-               fprintf(stdout, "[ERROR] Entropy coding options -C [2GR,3GR] are only compatible with predictive-based transform algorithms: -T [3RLS,3LSE].\n");\r
-               return 1;\r
-       }\r
-       if (parameters->encoding_format == ENCOD_3EB)\r
-               parameters->mode |= (1 << 6);\r
-\r
-       if ((parameters->mode >> 6) & 1) {\r
-               parameters->encoding_format = ENCOD_3EB;\r
-       }\r
-\r
-       if((parameters->numresolution[2] == 0 || (parameters->numresolution[1] == 0) || (parameters->numresolution[0] == 0))) {\r
-               fprintf(stdout, "[ERROR] -n 'resolution levels' argument error ! Resolutions must be greater than 1 in order to perform DWT.\n");\r
-               return 1;\r
-       }\r
-       if (parameters->numresolution[1] != parameters->numresolution[0]) {\r
-               fprintf(stdout, "[ERROR] -n 'resolution levels' argument error ! Resolutions in X and Y axis must be the same in this implementation.\n");\r
-               return 1;\r
-       }\r
-       \r
-       if (parameters->numresolution[2] > parameters->numresolution[0]) {\r
-               fprintf(stdout, "[ERROR] -n 'resolution levels' argument error ! Resolutions in Z axis must be lower than in X-Y axis.\n");\r
-               return 1;\r
-       }\r
-       \r
-       if (parameters->dcoffset >= 128 && parameters->dcoffset <= -128) {\r
-               fprintf(stdout, "[ERROR] -D 'DC offset' argument error ! Value must be -128<=DCO<=128.\n");\r
-               return 1;\r
-       }\r
-\r
-       if(parameters->numresolution[2] != 1) {\r
-               parameters->transform_format = TRF_3D_DWT;\r
-               /*fprintf(stdout, "[Warning] Resolution level in axial dim > 1 : 3D-DWT will be performed... \n");*/\r
-       } else if (parameters->numresolution[2] == 1) {\r
-               parameters->transform_format = TRF_2D_DWT;\r
-               /*fprintf(stdout, "[Warning] Resolution level in axial dim == 1 : 2D-DWT will be performed... \n");*/\r
-       }\r
-       \r
-       if ((parameters->cod_format == J2K_CFMT) && (parameters->transform_format != TRF_2D_DWT || parameters->encoding_format != ENCOD_2EB)) {\r
-               fprintf(stdout, "[WARNING] Incompatible options -o *.j2k and defined transform or encoding algorithm. Latter will be ignored\n");\r
-               parameters->transform_format = TRF_2D_DWT;\r
-               parameters->encoding_format = ENCOD_2EB;\r
-       }\r
-\r
-       if ((parameters->cp_disto_alloc || parameters->cp_fixed_alloc || parameters->cp_fixed_quality) && (!(parameters->cp_disto_alloc ^ parameters->cp_fixed_quality))) {\r
-               fprintf(stdout, "[ERROR] Options -r and -q cannot be used together !!\n");\r
-               return 1;\r
-       }                               /* mod fixed_quality */\r
-\r
-       /* if no rate entered, lossless by default */\r
-       if (parameters->tcp_numlayers == 0) {\r
-               parameters->tcp_rates[0] = 0.0; /* MOD antonin : losslessbug */\r
-               parameters->tcp_numlayers++;\r
-               parameters->cp_disto_alloc = 1;\r
-       }\r
-\r
-       if((parameters->cp_tx0 > parameters->volume_offset_x0) || (parameters->cp_ty0 > parameters->volume_offset_y0) || (parameters->cp_tz0 > parameters->volume_offset_z0)) {\r
-               fprintf(stdout, "[ERROR] Tile offset dimension is unnappropriate --> TX0(%d)<=IMG_X0(%d) TYO(%d)<=IMG_Y0(%d) TZO(%d)<=IMG_Z0(%d)\n",\r
-                       parameters->cp_tx0, parameters->volume_offset_x0, parameters->cp_ty0, parameters->volume_offset_y0, \r
-                       parameters->cp_tz0, parameters->volume_offset_z0);\r
-               return 1;\r
-       }\r
-\r
-       for (i = 0; i < parameters->numpocs; i++) {\r
-               if (parameters->POC[i].prg == -1) {\r
-                       fprintf(stdout,"[ERROR] Unrecognized progression order in option -P (POC n %d) [LRCP, RLCP, RPCL, PCRL, CPRL] !!\n",i + 1);\r
-               }\r
-       }\r
-       return 0;\r
-}\r
-\r
-/* -------------------------------------------------------------------------- */\r
-\r
-/**\r
-sample error callback expecting a FILE* client object\r
-*/\r
-void error_callback(const char *msg, void *client_data) {\r
-       FILE *stream = (FILE*)client_data;\r
-       fprintf(stream, "[ERROR] %s", msg);\r
-}\r
-/**\r
-sample warning callback expecting a FILE* client object\r
-*/\r
-void warning_callback(const char *msg, void *client_data) {\r
-       FILE *stream = (FILE*)client_data;\r
-       fprintf(stream, "[WARNING] %s", msg);\r
-}\r
-/**\r
-sample debug callback expecting a FILE* client object\r
-*/\r
-void info_callback(const char *msg, void *client_data) {\r
-       FILE *stream = (FILE*)client_data;\r
-       fprintf(stream, "[INFO] %s", msg);\r
-}\r
-\r
-/* -------------------------------------------------------------------------- */\r
-\r
-int main(int argc, char **argv) {\r
-       bool bSuccess;\r
-       bool delete_comment = true;\r
-       opj_cparameters_t parameters;   /* compression parameters */\r
-       opj_event_mgr_t event_mgr;              /* event manager */\r
-       opj_volume_t *volume = NULL;\r
-\r
-       /* \r
-       configure the event callbacks (not required)\r
-       setting of each callback is optionnal \r
-       */\r
-       memset(&event_mgr, 0, sizeof(opj_event_mgr_t));\r
-       event_mgr.error_handler = error_callback;\r
-       event_mgr.warning_handler = warning_callback;\r
-       event_mgr.info_handler = info_callback;\r
-\r
-       /* set encoding parameters to default values */\r
-       opj_set_default_encoder_parameters(&parameters);\r
-\r
-       /* parse input and get user encoding parameters */\r
-       if(parse_cmdline_encoder(argc, argv, &parameters) == 1) {\r
-               return 0;\r
-       }\r
-\r
-       if(parameters.cp_comment == NULL) {\r
-               parameters.cp_comment = "Created by OpenJPEG version JP3D";\r
-               /* no need to delete parameters.cp_comment on exit */\r
-               delete_comment = false;\r
-       }\r
-       \r
-       /* encode the destination volume */\r
-       /* ---------------------------- */\r
-       if (parameters.cod_format == J3D_CFMT || parameters.cod_format == J2K_CFMT)     {\r
-               int codestream_length, pixels, bitsin;\r
-               opj_cio_t *cio = NULL;\r
-               FILE *f = NULL;\r
-               opj_cinfo_t* cinfo = NULL;\r
-               \r
-               /* decode the source volume */\r
-               /* ----------------------- */\r
-               switch (parameters.decod_format) {\r
-                       case PGX_DFMT: \r
-                               fprintf(stdout, "[INFO] Loading pgx file(s)\n");\r
-                               volume = pgxtovolume(parameters.infile, &parameters);\r
-                               if (!volume) {\r
-                                       fprintf(stdout, "[ERROR] Unable to load pgx files\n");\r
-                                       return 1;\r
-                               }\r
-                               break;\r
-                       \r
-                       case BIN_DFMT:\r
-                               fprintf(stdout, "[INFO] Loading bin file\n");\r
-                               volume = bintovolume(parameters.infile, parameters.imgfile, &parameters);\r
-                               if (!volume) {\r
-                                       fprintf(stdout, "[ERROR] Unable to load bin file\n");\r
-                                       return 1;\r
-                               }\r
-                               break;\r
-\r
-                       case IMG_DFMT:\r
-                               fprintf(stdout, "[INFO] Loading img file\n");\r
-                               volume = imgtovolume(parameters.infile, &parameters);\r
-                               if (!volume) {\r
-                                       fprintf(stderr, "[ERROR] Unable to load img file\n");\r
-                                       return 1;\r
-                               }\r
-                               break;\r
-               }\r
-               \r
-               /* get a JP3D or J2K compressor handle */\r
-               if (parameters.cod_format == J3D_CFMT) \r
-            cinfo = opj_create_compress(CODEC_J3D);\r
-               else if (parameters.cod_format == J2K_CFMT) \r
-            cinfo = opj_create_compress(CODEC_J2K);\r
-\r
-               /* catch events using our callbacks and give a local context */\r
-               opj_set_event_mgr((opj_common_ptr)cinfo, &event_mgr, stdout);                   \r
-\r
-               /* setup the encoder parameters using the current volume and using user parameters */\r
-               opj_setup_encoder(cinfo, &parameters, volume);\r
-               \r
-               /* open a byte stream for writing */\r
-               /* allocate memory for all tiles */\r
-               cio = opj_cio_open((opj_common_ptr)cinfo, NULL, 0);\r
-\r
-               /* encode the volume */\r
-               /*fprintf(stdout, "[INFO] Encode the volume\n");*/\r
-               bSuccess = opj_encode(cinfo, cio, volume, parameters.index);\r
-               if (!bSuccess) {\r
-                       opj_cio_close(cio);\r
-                       fprintf(stdout, "[ERROR] Failed to encode volume\n");\r
-                       return 1;\r
-               }\r
-               codestream_length = cio_tell(cio);\r
-               pixels =(volume->x1 - volume->x0) * (volume->y1 - volume->y0) * (volume->z1 - volume->z0);\r
-               bitsin = pixels * volume->comps[0].prec;\r
-               fprintf(stdout, "[RESULT] Volume: %d x %d x %d (x %d bpv)\n Codestream: %d B,  Ratio: %5.3f bpv,  (%5.3f : 1) \n", \r
-                       (volume->x1 - volume->x0),(volume->y1 - volume->y0),(volume->z1 - volume->z0),volume->comps[0].prec,\r
-                       codestream_length, ((double)codestream_length * 8.0/(double)pixels), ((double)bitsin/(8.0*(double)codestream_length)));\r
-\r
-               /* write the buffer to disk */\r
-               f = fopen(parameters.outfile, "wb");\r
-               if (!f) {\r
-                       fprintf(stdout, "[ERROR] Failed to open %s for writing\n", parameters.outfile);\r
-                       return 1;\r
-               }\r
-               fwrite(cio->buffer, 1, codestream_length, f);\r
-               fclose(f);\r
-\r
-               /* close and free the byte stream */\r
-               opj_cio_close(cio);\r
-\r
-               /* free remaining compression structures */\r
-               opj_destroy_compress(cinfo);\r
-       } else {\r
-               fprintf(stdout, "[ERROR] Cod_format != JP3d !!! \n");\r
-               return 1;\r
-       }\r
-\r
-       /* free user parameters structure */\r
-       if(delete_comment) {\r
-               if(parameters.cp_comment) free(parameters.cp_comment);\r
-       }\r
-       if(parameters.cp_matrice) free(parameters.cp_matrice);\r
-\r
-       /* free volume data */\r
-       opj_volume_destroy(volume);\r
-       \r
-       return 0;\r
-}\r
+/*
+ * Copyright (c) 2001-2003, David Janssens
+ * Copyright (c) 2002-2003, Yannick Verschueren
+ * Copyright (c) 2003-2005, Francois Devaux and Antonin Descampe
+ * Copyright (c) 2005, Herve Drolon, FreeImage Team
+ * Copyright (c) 2002-2005, Communications and remote sensing Laboratory, Universite catholique de Louvain, Belgium
+ * Copyright (c) 2006, M�nica D�ez Garc�a, Image Processing Laboratory, University of Valladolid, Spain
+ * All rights reserved.
+ *
+ * Redistribution and use in source and binary forms, with or without
+ * modification, are permitted provided that the following conditions
+ * are met:
+ * 1. Redistributions of source code must retain the above copyright
+ *    notice, this list of conditions and the following disclaimer.
+ * 2. Redistributions in binary form must reproduce the above copyright
+ *    notice, this list of conditions and the following disclaimer in the
+ *    documentation and/or other materials provided with the distribution.
+ *
+ * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS `AS IS'
+ * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+ * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+ * ARE DISCLAIMED.  IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE
+ * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+ * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+ * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
+ * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
+ * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
+ * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
+ * POSSIBILITY OF SUCH DAMAGE.
+ */
+#include <stdio.h>
+#include <string.h>
+#include <stdlib.h>
+
+#include "opj_config.h"
+#include "openjp3d.h"
+#include "opj_getopt.h"
+#include "convert.h"
+
+#ifdef _WIN32
+#include <windows.h>
+#else
+#define stricmp strcasecmp
+#define strnicmp strncasecmp
+#endif /* _WIN32 */
+
+/* ----------------------------------------------------------------------- */
+
+void encode_help_display()
+{
+    fprintf(stdout, "List of parameters for the JPEG2000 Part 10 encoder:\n");
+    fprintf(stdout, "------------\n");
+    fprintf(stdout, "\n");
+    fprintf(stdout, "Required Parameters (except with -h):\n");
+    fprintf(stdout, "\n");
+    fprintf(stdout,
+            "-i           : source file  (-i source.bin or source*.pgx) \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout,
+            "-m           : source characteristics file (-m imgfile.img) \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout, "-o           : destination file (-o dest.jp3d) \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout, "Optional Parameters:\n");
+    fprintf(stdout, "\n");
+    fprintf(stdout, "-h           : display the help information \n ");
+    fprintf(stdout, "\n");
+    fprintf(stdout, "-n           : number of resolutions (-n 3,3,3) \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout,
+            "-I           : use the irreversible transforms: ICT + DWT 9-7 (-I) \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout, "-C           : coding algorithm (-C 2EB) [2EB, 3EB] \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout,
+            "-r           : different compression ratios for successive layers (-r 20,10,5)\n ");
+    fprintf(stdout,
+            "           - The rate specified for each quality level is the desired compression factor.\n");
+    fprintf(stdout, "           - Rate 1 means lossless compression\n");
+    fprintf(stdout,
+            "               (options -r and -q cannot be used together)\n ");
+    fprintf(stdout, "\n");
+    fprintf(stdout,
+            "-q           : different psnr for successive layers (-q 30,40,50) \n ");
+    fprintf(stdout,
+            "               (options -r and -q cannot be used together)\n ");
+    fprintf(stdout, "\n");
+    fprintf(stdout, "-b           : size of code block (-b 32,32,32) \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout, "-c           : size of precinct (-c 128,128,128) \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout, "-t           : size of tile (-t 512,512,512) \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout,
+            "-p           : progression order (-p LRCP) [LRCP, RLCP, RPCL, PCRL, CPRL] \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout, "-s           : subsampling factor (-s 2,2,2) [-s X,Y,Z] \n");
+    fprintf(stdout, "                    - Remark: subsampling bigger than 2 can produce error\n");
+    fprintf(stdout, "\n");
+    fprintf(stdout, "-SOP         : write SOP marker before each packet \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout, "-EPH         : write EPH marker after each header packet \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout,
+            "-M           : code-block style (-M 0) [1=BYPASS(LAZY) 2=RESET 4=RESTART(TERMALL)\n");
+    fprintf(stdout, "                 8=VSC 16=PTERM 32=SEGSYM 64=3DCTXT] \n");
+    fprintf(stdout,
+            "                 Indicate multiple modes by adding their values. \n");
+    fprintf(stdout,
+            "                 ex: RESTART(4) + RESET(2) + SEGMARK(32) = -M 38\n");
+    fprintf(stdout, "\n");
+    fprintf(stdout, "-D           : define DC offset (-D 12) \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout,
+            "-x           : create an index file *.Idx (-x index_name.Idx) \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout,
+            "-ROI         : c=%%d,U=%%d : quantization indices upshifted \n");
+    fprintf(stdout, "               for component c=%%d [%%d = 0,1,2]\n");
+    fprintf(stdout,
+            "               with a value of U=%%d [0 <= %%d <= 37] (i.e. -ROI:c=0,U=25) \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout,
+            "-d           : offset of the origin of the volume (-d 150,300,100) \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout,
+            "-l           : offset of the origin of the tiles (-l 100,75,25) \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout, "\n");
+    fprintf(stdout, "DEFAULT CODING:\n");
+    fprintf(stdout, "------------\n");
+    fprintf(stdout, "\n");
+    fprintf(stdout, " * Lossless\n");
+    fprintf(stdout, " * 1 tile\n");
+    fprintf(stdout,
+            " * Size of precinct : 2^15 x 2^15 x 2^15 (means 1 precinct)\n");
+    fprintf(stdout, " * Size of code-block : 64 x 64 x 64\n");
+    fprintf(stdout, " * Number of resolutions in x, y and z axis: 3\n");
+    fprintf(stdout, " * No SOP marker in the codestream\n");
+    fprintf(stdout, " * No EPH marker in the codestream\n");
+    fprintf(stdout, " * No sub-sampling in x, y or z direction\n");
+    fprintf(stdout, " * No mode switch activated\n");
+    fprintf(stdout, " * Progression order: LRCP\n");
+    fprintf(stdout, " * No index file\n");
+    fprintf(stdout, " * No ROI upshifted\n");
+    fprintf(stdout, " * No offset of the origin of the volume\n");
+    fprintf(stdout, " * No offset of the origin of the tiles\n");
+    fprintf(stdout, " * Reversible DWT 5-3 on each 2D slice\n");
+    fprintf(stdout, " * Coding algorithm: 2D-EBCOT \n");
+    fprintf(stdout, "\n");
+    fprintf(stdout, "REMARKS:\n");
+    fprintf(stdout, "---------\n");
+    fprintf(stdout, "\n");
+    fprintf(stdout,
+            "- The markers written to the main_header are : SOC SIZ COD QCD COM.\n");
+    fprintf(stdout,
+            "- COD and QCD markers will never appear in the tile_header.\n");
+    fprintf(stdout, "\n");
+    fprintf(stdout,
+            "- You need enough disk space memory (twice the original) to encode \n");
+    fprintf(stdout,
+            "the volume,i.e. for a 1.5 GB volume you need a minimum of 3GB of disk memory)\n");
+    fprintf(stdout, "\n");
+    fprintf(stdout,
+            "- When loading *.pgx files, a relative path to directory is needed for input argument \n");
+    fprintf(stdout,
+            " followed by the common prefix of the slices and a '*' character representing sequential numeration.\n");
+    fprintf(stdout, "( -i relativepath/slices*.pgx )\n");
+    fprintf(stdout, "\n");
+    fprintf(stdout, " - The index file has the structure below:\n");
+    fprintf(stdout, "\n");
+    fprintf(stdout, "\t        Image_height Image_width Image_depth\n");
+    fprintf(stdout, "\t        Progression order: 0 (LRCP)\n");
+    fprintf(stdout, "\t        Tiles_size_X Tiles_size_Y Tiles_size_Z\n");
+    fprintf(stdout, "\t        Components_nb\n");
+    fprintf(stdout, "\t        Layers_nb\n");
+    fprintf(stdout, "\t        Decomposition_levels\n");
+    fprintf(stdout,
+            "\t        [Precincts_size_X_res_Nr Precincts_size_Y_res_Nr Precincts_size_Z_res_Nr]\n\t  ...\n");
+    fprintf(stdout,
+            "\t        [Precincts_size_X_res_0 Precincts_size_Y_res_0 Precincts_size_Z_res_0]\n");
+    fprintf(stdout, "\t        Main_header_end_position\n");
+    fprintf(stdout, "\t        Codestream_size\n");
+    fprintf(stdout,
+            "\t        Tile_0 [start_pos end_header end_pos TotalDisto NumPix MaxMSE]\n");
+    fprintf(stdout, "\t        ...\n");
+    fprintf(stdout,
+            "\t        Tile_Nt [  ''         ''        ''        ''       ''    ''  ]\n");
+    fprintf(stdout,
+            "\t  Tpacket_0 [Tile layer res. comp. prec. start_pos end_pos disto]\n");
+    fprintf(stdout, "\t  ...\n");
+    fprintf(stdout,
+            "\t  Tpacket_Np [''   ''    ''   ''    ''       ''       ''     '' ]\n");
+    fprintf(stdout, "\t  MaxDisto\n");
+    fprintf(stdout, "\t  TotalDisto\n\n");
+    fprintf(stdout, "\n");
+
+}
+
+OPJ_PROG_ORDER give_progression(char progression[4])
+{
+    if (strncmp(progression, "LRCP", 4) == 0) {
+        return LRCP;
+    }
+    if (strncmp(progression, "RLCP", 4) == 0) {
+        return RLCP;
+    }
+    if (strncmp(progression, "RPCL", 4) == 0) {
+        return RPCL;
+    }
+    if (strncmp(progression, "PCRL", 4) == 0) {
+        return PCRL;
+    }
+    if (strncmp(progression, "CPRL", 4) == 0) {
+        return CPRL;
+    }
+
+    return PROG_UNKNOWN;
+}
+
+OPJ_TRANSFORM give_transform(char transform[4])
+{
+    if (strncmp(transform, "2DWT", 4) == 0) {
+        return TRF_2D_DWT;
+    }
+    if (strncmp(transform, "3DWT", 4) == 0) {
+        return TRF_3D_DWT;
+    }
+    return TRF_UNKNOWN;
+}
+
+OPJ_ENTROPY_CODING give_coding(char coding[3])
+{
+
+    if (strncmp(coding, "2EB", 3) == 0) {
+        return ENCOD_2EB;
+    }
+    if (strncmp(coding, "3EB", 3) == 0) {
+        return ENCOD_3EB;
+    }
+    /*if(strncmp(coding, "2GR", 3) == 0) {
+        return ENCOD_2GR;
+    }
+    if(strncmp(coding, "3GR", 3) == 0) {
+        return ENCOD_3GR;
+    }*/
+
+    return ENCOD_UNKNOWN;
+}
+
+int get_file_format(char *filename)
+{
+    int i;
+    static const char *extension[] = {"pgx", "bin", "img", "j3d", "jp3d", "j2k"};
+    static const int format[] = { PGX_DFMT, BIN_DFMT, IMG_DFMT, J3D_CFMT, J3D_CFMT, J2K_CFMT};
+    char * ext = strrchr(filename, '.');
+    if (ext) {
+        ext++;
+        for (i = 0; i < sizeof(format) / sizeof(*format); i++) {
+            if (strnicmp(ext, extension[i], 3) == 0) {
+                return format[i];
+            }
+        }
+    }
+
+    return -1;
+}
+
+/* ------------------------------------------------------------------------------------ */
+
+int parse_cmdline_encoder(int argc, char **argv, opj_cparameters_t *parameters)
+{
+    int i, value;
+
+    /* parse the command line */
+
+    while (1) {
+        int c = opj_getopt(argc, argv,
+                           "i:m:o:r:q:f:t:n:c:b:x:p:s:d:hP:S:E:M:D:R:l:T:C:A:I");
+        if (c == -1) {
+            break;
+        }
+        switch (c) {
+        case 'i': {         /* input file */
+            char *infile = opj_optarg;
+            parameters->decod_format = get_file_format(infile);
+            switch (parameters->decod_format) {
+            case PGX_DFMT:
+            case BIN_DFMT:
+            case IMG_DFMT:
+                break;
+            default:
+                fprintf(stdout,
+                        "[ERROR] Unrecognized format for infile : %s [accept only *.pgx or *.bin] !!\n\n",
+                        infile);
+                return 1;
+                break;
+            }
+            strncpy(parameters->infile, infile, MAX_PATH);
+            fprintf(stdout, "[INFO] Infile: %s \n", parameters->infile);
+
+        }
+        break;
+
+        /* ----------------------------------------------------- */
+        case 'm': {         /* input IMG file */
+            char *imgfile = opj_optarg;
+            int imgformat = get_file_format(imgfile);
+            switch (imgformat) {
+            case IMG_DFMT:
+                break;
+            default:
+                fprintf(stdout,
+                        "[ERROR] Unrecognized format for imgfile : %s [accept only *.img] !!\n\n",
+                        imgfile);
+                return 1;
+                break;
+            }
+            strncpy(parameters->imgfile, imgfile, MAX_PATH);
+            fprintf(stdout, "[INFO] Imgfile: %s Format: %d\n", parameters->imgfile,
+                    imgformat);
+        }
+        break;
+
+        /* ----------------------------------------------------- */
+        case 'o': {         /* output file */
+            char *outfile = opj_optarg;
+            parameters->cod_format = get_file_format(outfile);
+            switch (parameters->cod_format) {
+            case J3D_CFMT:
+            case J2K_CFMT:
+            case LSE_CFMT:
+                break;
+            default:
+                fprintf(stdout,
+                        "[ERROR] Unknown output format volume %s [only *.j2k, *.lse3d or *.jp3d]!! \n",
+                        outfile);
+                return 1;
+                break;
+            }
+            strncpy(parameters->outfile, outfile, MAX_PATH);
+            fprintf(stdout, "[INFO] Outfile: %s \n", parameters->outfile);
+        }
+        break;
+
+        /* ----------------------------------------------------- */
+
+        case 'r': {         /* define compression rates for each layer */
+            char *s = opj_optarg;
+            while (sscanf(s, "%f", &parameters->tcp_rates[parameters->tcp_numlayers]) ==
+                    1) {
+                parameters->tcp_numlayers++;
+                while (*s && *s != ',') {
+                    s++;
+                }
+                if (!*s) {
+                    break;
+                }
+                s++;
+            }
+            parameters->cp_disto_alloc = 1;
+        }
+        break;
+
+        /* ----------------------------------------------------- */
+
+        case 'q': {         /* define distorsion (PSNR) for each layer */
+            char *s = opj_optarg;
+            while (sscanf(s, "%f", &parameters->tcp_distoratio[parameters->tcp_numlayers])
+                    == 1) {
+                parameters->tcp_numlayers++;
+                while (*s && *s != ',') {
+                    s++;
+                }
+                if (!*s) {
+                    break;
+                }
+                s++;
+            }
+            parameters->cp_fixed_quality = 1;
+        }
+        break;
+
+        /* ----------------------------------------------------- */
+
+        case 'f': {
+            fprintf(stdout, "/---------------------------------------------------\\\n");
+            fprintf(stdout, "|  Fixed layer allocation option not implemented !!  |\n");
+            fprintf(stdout, "\\---------------------------------------------------/\n");
+            /*int *row = NULL, *col = NULL;
+            int numlayers = 0, matrix_width = 0;
+
+            char *s = opj_optarg;
+            sscanf(s, "%d", &numlayers);
+            s++;
+            if (numlayers > 9)
+                s++;
+
+            parameters->tcp_numlayers = numlayers;
+            matrix_width = parameters->numresolution[0] + parameters->numresolution[1] + parameters->numresolution[2];
+            parameters->cp_matrice = (int *) malloc(numlayers * matrix_width * sizeof(int));
+            s = s + 2;
+
+            for (i = 0; i < numlayers; i++) {
+                row = &parameters->cp_matrice[i * matrix_width];
+                col = row;
+                parameters->tcp_rates[i] = 1;
+                sscanf(s, "%d,", &col[0]);
+                s += 2;
+                if (col[0] > 9)
+                    s++;
+                col[1] = 0;
+                col[2] = 0;
+                for (j = 1; j < matrix_width; j++) {
+                    col += 3; j+=2;
+                    sscanf(s, "%d,%d,%d", &col[0], &col[1], &col[2]);
+                    s += 6;
+                    if (col[0] > 9)
+                        s++;
+                    if (col[1] > 9)
+                        s++;
+                    if (col[2] > 9)
+                        s++;
+                }
+                if (i < numlayers - 1)
+                    s++;
+            }
+            parameters->cp_fixed_alloc = 1; */
+        }
+        break;
+
+        /* ----------------------------------------------------- */
+
+        case 't': {         /* tiles */
+            if (sscanf(opj_optarg, "%d,%d,%d", &parameters->cp_tdx, &parameters->cp_tdy,
+                       &parameters->cp_tdz) != 3) {
+                fprintf(stdout,
+                        "[ERROR] '-t' 'dimensions of tiles' argument error !  [-t tdx,tdy,tdz]\n");
+                return 1;
+            }
+            parameters->tile_size_on = true;
+        }
+        break;
+
+        /* ----------------------------------------------------- */
+
+        case 'n': {         /* resolution */
+            int aux;
+            aux = sscanf(opj_optarg, "%d,%d,%d", &parameters->numresolution[0],
+                         &parameters->numresolution[1], &parameters->numresolution[2]);
+            if (aux == 2) {
+                parameters->numresolution[2] = 1;
+            } else if (aux == 1) {
+                parameters->numresolution[1] = parameters->numresolution[0];
+                parameters->numresolution[2] = 1;
+            } else if (aux == 0) {
+                parameters->numresolution[0] = 1;
+                parameters->numresolution[1] = 1;
+                parameters->numresolution[2] = 1;
+            }
+        }
+        break;
+
+        /* ----------------------------------------------------- */
+        case 'c': {         /* precinct dimension */
+            char sep;
+            int res_spec = 0;
+            int aux;
+            char *s = opj_optarg;
+            do {
+                sep = 0;
+                aux = sscanf(s, "[%d,%d,%d]%c", &parameters->prct_init[0][res_spec],
+                             &parameters->prct_init[1][res_spec], &parameters->prct_init[2][res_spec], &sep);
+                if (sep == ',' && aux != 4) {
+                    fprintf(stdout,
+                            "[ERROR] '-c' 'dimensions of precincts' argument error !  [-c [prcx_res0,prcy_res0,prcz_res0],...,[prcx_resN,prcy_resN,prcz_resN]]\n");
+                    return 1;
+                }
+                parameters->csty |= 0x01;
+                res_spec++;
+                s = strpbrk(s, "]") + 2;
+            } while (sep == ',');
+            parameters->res_spec = res_spec; /* number of precinct size specifications */
+        }
+        break;
+
+        /* ----------------------------------------------------- */
+
+        case 'b': {         /* code-block dimension */
+            int cblockw_init = 0, cblockh_init = 0, cblockl_init = 0;
+            if (sscanf(opj_optarg, "%d,%d,%d", &cblockw_init, &cblockh_init,
+                       &cblockl_init) != 3) {
+                fprintf(stdout,
+                        "[ERROR] '-b' 'dimensions of codeblocks' argument error !  [-b cblkx,cblky,cblkz]\n");
+                return 1;
+            }
+            if (cblockw_init * cblockh_init * cblockl_init > (1 << 18) ||
+                    cblockw_init > 1024 || cblockw_init < 4 || cblockh_init > 1024 ||
+                    cblockh_init < 4 || cblockl_init > 1024 || cblockl_init < 4) {
+                fprintf(stdout,
+                        "[ERROR] Size of code_block error (option -b) !!\n\nRestriction :\n * width*height*length<=4096\n * 4<=width,height,length<= 1024\n\n");
+                return 1;
+            }
+            parameters->cblock_init[0] = cblockw_init;
+            parameters->cblock_init[1] = cblockh_init;
+            parameters->cblock_init[2] = cblockl_init;
+        }
+        break;
+
+        /* ----------------------------------------------------- */
+
+        case 'x': {         /* creation of index file */
+            char *index = opj_optarg;
+            strncpy(parameters->index, index, MAX_PATH);
+            parameters->index_on = 1;
+        }
+        break;
+
+        /* ----------------------------------------------------- */
+
+        case 'p': {         /* progression order */
+            char progression[4];
+
+            strncpy(progression, opj_optarg, 4);
+            parameters->prog_order = give_progression(progression);
+            if (parameters->prog_order == -1) {
+                fprintf(stdout,
+                        "[ERROR] Unrecognized progression order [LRCP, RLCP, RPCL, PCRL, CPRL] !!\n");
+                return 1;
+            }
+        }
+        break;
+
+        /* ----------------------------------------------------- */
+
+        case 's': {         /* subsampling factor */
+            if (sscanf(opj_optarg, "%d,%d,%d", &parameters->subsampling_dx,
+                       &parameters->subsampling_dy, &parameters->subsampling_dz) != 3) {
+                fprintf(stdout, "[ERROR] '-s' sub-sampling argument error !  [-s dx,dy,dz]\n");
+                return 1;
+            }
+        }
+        break;
+
+        /* ----------------------------------------------------- */
+
+        case 'd': {         /* coordonnate of the reference grid */
+            if (sscanf(opj_optarg, "%d,%d,%d", &parameters->volume_offset_x0,
+                       &parameters->volume_offset_y0, &parameters->volume_offset_z0) != 3) {
+                fprintf(stdout,
+                        "[ERROR] -d 'coordonnate of the reference grid' argument error !! [-d x0,y0,z0]\n");
+                return 1;
+            }
+        }
+        break;
+
+        /* ----------------------------------------------------- */
+
+        case 'h': {         /* display an help description */
+            encode_help_display();
+            return 1;
+        }
+        break;
+
+        /* ----------------------------------------------------- */
+
+        case 'P': {         /* POC */
+            int numpocs = 0;        /* number of progression order change (POC) default 0 */
+            opj_poc_t *POC = NULL;  /* POC : used in case of Progression order change */
+
+            char *s = opj_optarg;
+            POC = parameters->POC;
+
+            fprintf(stdout, "/----------------------------------\\\n");
+            fprintf(stdout, "|  POC option not fully tested !!  |\n");
+            fprintf(stdout, "\\----------------------------------/\n");
+
+            while (sscanf(s, "T%d=%d,%d,%d,%d,%d,%s", &POC[numpocs].tile,
+                          &POC[numpocs].resno0, &POC[numpocs].compno0,
+                          &POC[numpocs].layno1, &POC[numpocs].resno1,
+                          &POC[numpocs].compno1, POC[numpocs].progorder) == 7) {
+                POC[numpocs].prg = give_progression(POC[numpocs].progorder);
+                /* POC[numpocs].tile; */
+                numpocs++;
+                while (*s && *s != '/') {
+                    s++;
+                }
+                if (!*s) {
+                    break;
+                }
+                s++;
+            }
+            parameters->numpocs = numpocs;
+        }
+        break;
+
+        /* ------------------------------------------------------ */
+
+        case 'S': {         /* SOP marker */
+            parameters->csty |= 0x02;
+        }
+        break;
+
+        /* ------------------------------------------------------ */
+
+        case 'E': {         /* EPH marker */
+            parameters->csty |= 0x04;
+        }
+        break;
+
+        /* ------------------------------------------------------ */
+
+        case 'M': {         /* Codification mode switch */
+            fprintf(stdout, "[INFO] Mode switch option not fully tested !!\n");
+            value = 0;
+            if (sscanf(opj_optarg, "%d", &value) == 1) {
+                for (i = 0; i <= 6; i++) {
+                    int cache = value & (1 << i);
+                    if (cache) {
+                        parameters->mode |= (1 << i);
+                    }
+                }
+            }
+        }
+        break;
+
+        /* ------------------------------------------------------ */
+
+        case 'D': {         /* DCO */
+            if (sscanf(opj_optarg, "%d", &parameters->dcoffset) != 1) {
+                fprintf(stdout, "[ERROR] DC offset error !! [-D %d]\n", parameters->dcoffset);
+                return 1;
+            }
+        }
+        break;
+
+        /* ------------------------------------------------------ */
+
+        case 'R': {         /* ROI */
+            if (sscanf(opj_optarg, "OI:c=%d,U=%d", &parameters->roi_compno,
+                       &parameters->roi_shift) != 2) {
+                fprintf(stdout, "[ERROR] ROI error !! [-ROI:c='compno',U='shift']\n");
+                return 1;
+            }
+        }
+        break;
+
+        /* ------------------------------------------------------ */
+
+        case 'l': {         /* Tile offset */
+            if (sscanf(opj_optarg, "%d,%d,%d", &parameters->cp_tx0, &parameters->cp_ty0,
+                       &parameters->cp_tz0) != 3) {
+                fprintf(stdout, "[ERROR] -l 'tile offset' argument error !! [-l X0,Y0,Z0]");
+                return 1;
+            }
+        }
+        break;
+
+        /* ------------------------------------------------------
+
+        case 'T':            // Tranformation of original data (2D-DWT/3D-DWT/3D-RLS/2D-DWT+1D-RLS)
+        {
+        char transform[4];
+
+        strncpy(transform, opj_optarg, 4);
+        parameters->transform_format = give_transform(transform);
+        if (parameters->transform_format == -1) {
+            fprintf(stdout, "[ERROR] -T 'Transform domain' argument error !! [-T 2DWT, 3DWT, 3RLS or 3LSE only]");
+             return 1;
+        }
+        }
+        break;
+
+         ------------------------------------------------------ */
+
+        case 'C': {         /* Coding of transformed data */
+            char coding[3];
+
+            strncpy(coding, opj_optarg, 3);
+            parameters->encoding_format = give_coding(coding);
+            if (parameters->encoding_format == -1) {
+                fprintf(stdout,
+                        "[ERROR] -C 'Coding algorithm' argument error !! [-C 2EB, 3EB, 2GR, 3GR or GRI only]");
+                return 1;
+            }
+        }
+        break;
+
+        /* ------------------------------------------------------ */
+
+        case 'I': {         /* reversible or not */
+            parameters->irreversible = 1;
+        }
+        break;
+
+        default:
+            fprintf(stdout, "[ERROR] This option is not valid \"-%c %s\"\n", c, opj_optarg);
+            return 1;
+        }
+    }
+
+    /* check for possible errors */
+
+    if ((parameters->infile[0] == 0) || (parameters->outfile[0] == 0)) {
+        fprintf(stdout, "usage: jp3d_vm_enc -i volume-file -o jp3d-file (+ options)\n");
+        return 1;
+    }
+
+    if ((parameters->decod_format == BIN_DFMT) && (parameters->imgfile[0] == 0)) {
+        fprintf(stdout,
+                "usage: jp3d_vm_enc -i bin-volume-file -m img-file -o jp3d-file (+ options)\n");
+        return 1;
+    }
+
+    if ((parameters->decod_format != BIN_DFMT) &&
+            (parameters->decod_format != PGX_DFMT) &&
+            (parameters->decod_format != IMG_DFMT)) {
+        fprintf(stdout,
+                "usage: jp3d_vm_enc -i input-volume-file [*.bin,*.pgx,*.img] -o jp3d-file [*.jp3d,*.j2k] (+ options)\n");
+        return 1;
+    }
+    if ((parameters->cod_format != J3D_CFMT) &&
+            (parameters->cod_format != J2K_CFMT)) {
+        fprintf(stdout,
+                "usage: jp3d_vm_enc -i input-volume-file [*.bin,*.pgx,*.img] -o jp3d-file [*.jp3d,*.j2k] (+ options)\n");
+        return 1;
+    }
+
+    if ((parameters->encoding_format == ENCOD_2GR ||
+            parameters->encoding_format == ENCOD_3GR) &&
+            parameters->transform_format != TRF_3D_LSE &&
+            parameters->transform_format != TRF_3D_RLS) {
+        fprintf(stdout,
+                "[ERROR] Entropy coding options -C [2GR,3GR] are only compatible with predictive-based transform algorithms: -T [3RLS,3LSE].\n");
+        return 1;
+    }
+    if (parameters->encoding_format == ENCOD_3EB) {
+        parameters->mode |= (1 << 6);
+    }
+
+    if ((parameters->mode >> 6) & 1) {
+        parameters->encoding_format = ENCOD_3EB;
+    }
+
+    if ((parameters->numresolution[2] == 0 || (parameters->numresolution[1] == 0) ||
+            (parameters->numresolution[0] == 0))) {
+        fprintf(stdout,
+                "[ERROR] -n 'resolution levels' argument error ! Resolutions must be greater than 1 in order to perform DWT.\n");
+        return 1;
+    }
+    if (parameters->numresolution[1] != parameters->numresolution[0]) {
+        fprintf(stdout,
+                "[ERROR] -n 'resolution levels' argument error ! Resolutions in X and Y axis must be the same in this implementation.\n");
+        return 1;
+    }
+
+    if (parameters->numresolution[2] > parameters->numresolution[0]) {
+        fprintf(stdout,
+                "[ERROR] -n 'resolution levels' argument error ! Resolutions in Z axis must be lower than in X-Y axis.\n");
+        return 1;
+    }
+
+    if (parameters->dcoffset >= 128 && parameters->dcoffset <= -128) {
+        fprintf(stdout,
+                "[ERROR] -D 'DC offset' argument error ! Value must be -128<=DCO<=128.\n");
+        return 1;
+    }
+
+    if (parameters->numresolution[2] != 1) {
+        parameters->transform_format = TRF_3D_DWT;
+        /*fprintf(stdout, "[Warning] Resolution level in axial dim > 1 : 3D-DWT will be performed... \n");*/
+    } else if (parameters->numresolution[2] == 1) {
+        parameters->transform_format = TRF_2D_DWT;
+        /*fprintf(stdout, "[Warning] Resolution level in axial dim == 1 : 2D-DWT will be performed... \n");*/
+    }
+
+    if ((parameters->cod_format == J2K_CFMT) &&
+            (parameters->transform_format != TRF_2D_DWT ||
+             parameters->encoding_format != ENCOD_2EB)) {
+        fprintf(stdout,
+                "[WARNING] Incompatible options -o *.j2k and defined transform or encoding algorithm. Latter will be ignored\n");
+        parameters->transform_format = TRF_2D_DWT;
+        parameters->encoding_format = ENCOD_2EB;
+    }
+
+    if ((parameters->cp_disto_alloc || parameters->cp_fixed_alloc ||
+            parameters->cp_fixed_quality) &&
+            (!(parameters->cp_disto_alloc ^ parameters->cp_fixed_quality))) {
+        fprintf(stdout, "[ERROR] Options -r and -q cannot be used together !!\n");
+        return 1;
+    }               /* mod fixed_quality */
+
+    /* if no rate entered, lossless by default */
+    if (parameters->tcp_numlayers == 0) {
+        parameters->tcp_rates[0] = 0.0; /* MOD antonin : losslessbug */
+        parameters->tcp_numlayers++;
+        parameters->cp_disto_alloc = 1;
+    }
+
+    if ((parameters->cp_tx0 > parameters->volume_offset_x0) ||
+            (parameters->cp_ty0 > parameters->volume_offset_y0) ||
+            (parameters->cp_tz0 > parameters->volume_offset_z0)) {
+        fprintf(stdout,
+                "[ERROR] Tile offset dimension is unnappropriate --> TX0(%d)<=IMG_X0(%d) TYO(%d)<=IMG_Y0(%d) TZO(%d)<=IMG_Z0(%d)\n",
+                parameters->cp_tx0, parameters->volume_offset_x0, parameters->cp_ty0,
+                parameters->volume_offset_y0,
+                parameters->cp_tz0, parameters->volume_offset_z0);
+        return 1;
+    }
+
+    for (i = 0; i < parameters->numpocs; i++) {
+        if (parameters->POC[i].prg == -1) {
+            fprintf(stdout,
+                    "[ERROR] Unrecognized progression order in option -P (POC n %d) [LRCP, RLCP, RPCL, PCRL, CPRL] !!\n",
+                    i + 1);
+        }
+    }
+    return 0;
+}
+
+/* -------------------------------------------------------------------------- */
+
+/**
+sample error callback expecting a FILE* client object
+*/
+void error_callback(const char *msg, void *client_data)
+{
+    FILE *stream = (FILE*)client_data;
+    fprintf(stream, "[ERROR] %s", msg);
+}
+/**
+sample warning callback expecting a FILE* client object
+*/
+void warning_callback(const char *msg, void *client_data)
+{
+    FILE *stream = (FILE*)client_data;
+    fprintf(stream, "[WARNING] %s", msg);
+}
+/**
+sample debug callback expecting a FILE* client object
+*/
+void info_callback(const char *msg, void *client_data)
+{
+    FILE *stream = (FILE*)client_data;
+    fprintf(stream, "[INFO] %s", msg);
+}
+
+/* -------------------------------------------------------------------------- */
+
+int main(int argc, char **argv)
+{
+    bool bSuccess;
+    bool delete_comment = true;
+    opj_cparameters_t parameters;   /* compression parameters */
+    opj_event_mgr_t event_mgr;      /* event manager */
+    opj_volume_t *volume = NULL;
+
+    /*
+    configure the event callbacks (not required)
+    setting of each callback is optionnal
+    */
+    memset(&event_mgr, 0, sizeof(opj_event_mgr_t));
+    event_mgr.error_handler = error_callback;
+    event_mgr.warning_handler = warning_callback;
+    event_mgr.info_handler = info_callback;
+
+    /* set encoding parameters to default values */
+    opj_set_default_encoder_parameters(&parameters);
+
+    /* parse input and get user encoding parameters */
+    if (parse_cmdline_encoder(argc, argv, &parameters) == 1) {
+        return 0;
+    }
+
+    if (parameters.cp_comment == NULL) {
+        parameters.cp_comment = "Created by OpenJPEG version JP3D";
+        /* no need to delete parameters.cp_comment on exit */
+        delete_comment = false;
+    }
+
+    /* encode the destination volume */
+    /* ---------------------------- */
+    if (parameters.cod_format == J3D_CFMT || parameters.cod_format == J2K_CFMT) {
+        int codestream_length, pixels, bitsin;
+        opj_cio_t *cio = NULL;
+        FILE *f = NULL;
+        opj_cinfo_t* cinfo = NULL;
+
+        /* decode the source volume */
+        /* ----------------------- */
+        switch (parameters.decod_format) {
+        case PGX_DFMT:
+            fprintf(stdout, "[INFO] Loading pgx file(s)\n");
+            volume = pgxtovolume(parameters.infile, &parameters);
+            if (!volume) {
+                fprintf(stdout, "[ERROR] Unable to load pgx files\n");
+                return 1;
+            }
+            break;
+
+        case BIN_DFMT:
+            fprintf(stdout, "[INFO] Loading bin file\n");
+            volume = bintovolume(parameters.infile, parameters.imgfile, &parameters);
+            if (!volume) {
+                fprintf(stdout, "[ERROR] Unable to load bin file\n");
+                return 1;
+            }
+            break;
+
+        case IMG_DFMT:
+            fprintf(stdout, "[INFO] Loading img file\n");
+            volume = imgtovolume(parameters.infile, &parameters);
+            if (!volume) {
+                fprintf(stderr, "[ERROR] Unable to load img file\n");
+                return 1;
+            }
+            break;
+        }
+
+        /* get a JP3D or J2K compressor handle */
+        if (parameters.cod_format == J3D_CFMT) {
+            cinfo = opj_create_compress(CODEC_J3D);
+        } else if (parameters.cod_format == J2K_CFMT) {
+            cinfo = opj_create_compress(CODEC_J2K);
+        }
+
+        /* catch events using our callbacks and give a local context */
+        opj_set_event_mgr((opj_common_ptr)cinfo, &event_mgr, stdout);
+
+        /* setup the encoder parameters using the current volume and using user parameters */
+        opj_setup_encoder(cinfo, &parameters, volume);
+
+        /* open a byte stream for writing */
+        /* allocate memory for all tiles */
+        cio = opj_cio_open((opj_common_ptr)cinfo, NULL, 0);
+
+        /* encode the volume */
+        /*fprintf(stdout, "[INFO] Encode the volume\n");*/
+        bSuccess = opj_encode(cinfo, cio, volume, parameters.index);
+        if (!bSuccess) {
+            opj_cio_close(cio);
+            fprintf(stdout, "[ERROR] Failed to encode volume\n");
+            return 1;
+        }
+        codestream_length = cio_tell(cio);
+        pixels = (volume->x1 - volume->x0) * (volume->y1 - volume->y0) *
+                 (volume->z1 - volume->z0);
+        bitsin = pixels * volume->comps[0].prec;
+        fprintf(stdout,
+                "[RESULT] Volume: %d x %d x %d (x %d bpv)\n Codestream: %d B,  Ratio: %5.3f bpv,  (%5.3f : 1) \n",
+                (volume->x1 - volume->x0), (volume->y1 - volume->y0), (volume->z1 - volume->z0),
+                volume->comps[0].prec,
+                codestream_length, ((double)codestream_length * 8.0 / (double)pixels),
+                ((double)bitsin / (8.0 * (double)codestream_length)));
+
+        /* write the buffer to disk */
+        f = fopen(parameters.outfile, "wb");
+        if (!f) {
+            fprintf(stdout, "[ERROR] Failed to open %s for writing\n", parameters.outfile);
+            return 1;
+        }
+        fwrite(cio->buffer, 1, codestream_length, f);
+        fclose(f);
+
+        /* close and free the byte stream */
+        opj_cio_close(cio);
+
+        /* free remaining compression structures */
+        opj_destroy_compress(cinfo);
+    } else {
+        fprintf(stdout, "[ERROR] Cod_format != JP3d !!! \n");
+        return 1;
+    }
+
+    /* free user parameters structure */
+    if (delete_comment) {
+        if (parameters.cp_comment) {
+            free(parameters.cp_comment);
+        }
+    }
+    if (parameters.cp_matrice) {
+        free(parameters.cp_matrice);
+    }
+
+    /* free volume data */
+    opj_volume_destroy(volume);
+
+    return 0;
+}